Mexican Quinoa Casserole Recipe
If you’re craving a dish that brings together vibrant flavors, wholesome ingredients, and a comforting, cheesy finish, look no further than this Mexican Quinoa Casserole. This recipe effortlessly balances the nuttiness of quinoa with the zest of jalapeno and lime, the sweetness of corn and bell peppers, and the hearty goodness of black beans, all smothered in rich enchilada sauce and melted cheese. Whether you’re feeding a crowd or simply treating yourself to a nourishing meal, Mexican Quinoa Casserole will delight your taste buds and warm your soul.

Ingredients You’ll Need
The magic of this Mexican Quinoa Casserole lies in its straightforward, vibrant ingredients. Each one adds a distinct layer of flavor, texture, or color, making this dish both satisfying and visually appealing.
- 1.25 cups uncooked quinoa: A nutrient-packed grain that serves as the hearty base of the casserole.
- 2 medium onions (diced): Adds sweetness and depth as they soften and caramelize.
- 6 cloves garlic (minced): For that essential savory punch that wakes up every bite.
- 1 jalapeno pepper (seeds removed and finely diced): Provides a gentle kick without overwhelming heat.
- 1 red bell pepper (diced): Brings vibrant color and a sweet crunch to the dish.
- 1 10 oz bag of frozen corn: Adds subtle sweetness and a pop of texture.
- 16 oz enchilada sauce: The rich, tangy sauce that ties all the flavors together.
- 2 cans of black beans (drained): For protein and hearty, creamy texture.
- 3 cups Mexican cheese blend (shredded): Melts beautifully for that irresistible gooey topping.
- Juice of 1 large lime: Infuses brightness and balances the richness.
- 1 tablespoon cumin: Adds earthiness and warmth.
- 1/4 teaspoon cayenne: A touch of spice to awaken the palate.
- 1 teaspoon chili powder: Enhances the bold, smoky undertones.
- 1/2 teaspoon smoked paprika: Adds a subtle smoky aroma and depth.
- Salt and pepper: To season perfectly to your liking.
- Diced roma tomatoes: For fresh, juicy garnishing at the end.
- Diced avocado: Creamy and cool contrast for serving.
- Sliced lime wedges: For an extra splash of citrus brightness.
- Sour cream: Optional but highly recommended to mellow out the spice.
- Tortilla chips: Perfect for crunchy scooping and dipping.
How to Make Mexican Quinoa Casserole
Step 1: Cook the Quinoa
Rinse your quinoa thoroughly to remove any bitterness, then cook it according to the package directions. Setting this aside once cooked lets it cool slightly and ensures every grain stays fluffy and light in the casserole rather than clumping together.
Step 2: Prepare the Vegetables
Remove seeds from the jalapeno and dice it finely alongside the garlic, onions, and red bell pepper. This prep work sets the stage for sautéing these aromatics to lock in their natural sweetness while melding their flavors beautifully.
Step 3: Sauté the Veggies
In a hot skillet drizzled with olive oil, sauté the diced bell pepper, jalapeno, garlic, and onion over medium high heat. Stir frequently for about 8 to 10 minutes until the peppers soften and the mixture smells heavenly. Then toss in the frozen corn and continue cooking for 4 to 5 extra minutes to let it warm through and sweeten.
Step 4: Combine and Season the Ingredients
In a large bowl, stir together the cooked quinoa, sautéed vegetables, lime juice, drained black beans, and enchilada sauce. Add half the shredded Mexican cheese blend, along with the cumin, cayenne, chili powder, smoked paprika, salt, and pepper. Mix everything gently but thoroughly so every bite bursts with balanced spice and zest.
Step 5: Assemble and Bake
Transfer this vibrant mixture to a 9 x 13 baking dish and bake in a preheated 375°F oven for 20 minutes. Then, take the dish out and sprinkle the remaining cheese evenly on top, returning it to the oven for another 10 minutes or until the cheese is bubbly and golden. This final step adds the ooey-gooey, irresistible finish that elevates the casserole.
Step 6: Garnish and Serve
Remove from the oven and top with freshly diced roma tomatoes and creamy avocado. Serve immediately with lime wedges, sour cream, and crunchy tortilla chips for a customizable and festive meal experience.
How to Serve Mexican Quinoa Casserole

Garnishes
Adding fresh diced roma tomatoes and avocado on top isn’t just about visual appeal—it introduces fresh, juicy, and creamy textures that balance the casserole’s warm, cheesy heartiness perfectly. A squeeze of lime juice elevates it further with bright citrus notes, while a dollop of sour cream smooths the spices gently.
Side Dishes
This Mexican Quinoa Casserole pairs wonderfully with simple sides like a crisp garden salad or lightly sautéed greens. For an extra crunch and fun twist, serve alongside tortilla chips. The combination of creamy, cheesy, and crispy textures makes for a complete and satisfying meal.
Creative Ways to Present
Serve this casserole family-style straight from the baking dish for cozy gatherings or plate individual portions with a colorful side of guacamole and salsa for a festive presentation. For a crowd, arrange in small casserole dishes for easy serving, or scoop into warm corn tortillas for a fun taco twist.
Make Ahead and Storage
Storing Leftovers
Once cooled, store leftover Mexican Quinoa Casserole in airtight containers in the refrigerator. It keeps well for up to 4 days, making it a perfect option for easy weekday lunches or dinners that reheat beautifully without losing any of their fresh flavors.
Freezing
You can freeze this casserole for longer storage. Portion it into freezer-safe containers and it will stay fresh for up to 3 months. When ready to enjoy, thaw in the refrigerator overnight to maintain texture and flavor before reheating.
Reheating
Reheat leftovers in the oven at 350°F until warmed through, which keeps the cheese melty and the edges slightly crisp. Alternatively, microwave individual servings for convenience, just be sure to cover lightly to keep moisture in and avoid drying out.
FAQs
Can I use other grains instead of quinoa?
Absolutely! While quinoa provides a great texture and protein boost, you can swap it for brown rice or even couscous, though cooking times and liquid ratios may differ.
Is this dish spicy?
The level of spice is mild to moderate thanks to the jalapeno and cayenne, but you can adjust the heat by using fewer peppers or skipping the cayenne if you prefer a gentler flavor.
Can I make this casserole vegan?
Yes! Simply substitute the cheese with vegan cheese alternatives and use a plant-based sour cream if desired. The rest of the ingredients are naturally vegan-friendly.
How can I make this dish gluten-free?
This casserole is naturally gluten-free as long as you check that your enchilada sauce and spices do not contain any gluten additives. Quinoa itself is a great gluten-free grain choice.
What’s the best way to reheat without drying out the casserole?
Reheat gently in the oven at a moderate temperature, covering with foil to retain moisture, or microwave with a damp paper towel over the top to keep it from drying.
Final Thoughts
This Mexican Quinoa Casserole is truly one of those dishes that feels like a big, warm hug on a plate. Its vibrant flavors, wholesome ingredients, and satisfying textures combine to create something you’ll want to make again and again. Whether you’re cooking for family, friends, or just yourself, I can’t recommend trying this recipe enough. Give it a go, and I promise it’ll quickly become one of your go-to comfort meals.
PrintMexican Quinoa Casserole Recipe
This Mexican Quinoa Casserole is a flavorful, protein-packed vegetarian dish that combines quinoa with vibrant vegetables, black beans, and a zesty enchilada sauce. Topped with melted Mexican cheese blend and fresh garnishes like diced tomatoes, avocado, and lime wedges, it makes a hearty and nutritious meal perfect for weeknight dinners or casual gatherings.
- Prep Time: 15 minutes
- Cook Time: 45 minutes
- Total Time: 1 hour
- Yield: 6 servings 1x
- Category: Main Course
- Method: Baking and Sautéing
- Cuisine: Mexican
- Diet: Vegetarian
Ingredients
Grains and Beans
- 1.25 cups uncooked quinoa
- 2 cans black beans, drained
Vegetables
- 2 medium onions, diced
- 6 cloves garlic, minced
- 1 jalapeno pepper, seeds removed and finely diced
- 1 red bell pepper, diced
- 1 10 oz bag frozen corn
- Diced roma tomatoes (for topping)
- Diced avocado (for topping)
- Sliced lime wedges (for serving)
Spices and Sauces
- 16 oz enchilada sauce
- 1 tablespoon cumin
- 1/4 teaspoon cayenne pepper
- 1 teaspoon chili powder
- 1/2 teaspoon smoked paprika
- Salt, to taste
- Pepper, to taste
- Juice of 1 large lime
Dairy
- 3 cups Mexican cheese blend, shredded (divided: 1.5 cups for mixture, 1.5 cups for topping)
Additional
- Sour cream (optional, for serving)
- Tortilla chips (optional, for serving)
- 1 tablespoon olive oil (for sautéing)
Instructions
- Cook Quinoa: Rinse quinoa thoroughly under cold water to remove any bitterness. Cook according to package instructions, typically by simmering it in water until fluffy. Once cooked, set aside to cool slightly.
- Prepare Jalapeno: Remove seeds from the jalapeno pepper to reduce heat, then finely dice it for sautéing.
- Dice Aromatics and Vegetables: Mince the garlic, dice the onions and red bell pepper into small pieces to ensure even cooking and flavor distribution.
- Sauté Vegetables: In a skillet, heat 1 tablespoon of olive oil over medium-high heat. Add the diced bell pepper, jalapeno, garlic, and onion along with 1/4 teaspoon salt and 1/4 teaspoon pepper. Stir frequently and cook for 8 to 10 minutes until the vegetables begin to soften.
- Add Corn: Stir in the frozen corn to the skillet mixture and cook for another 4 to 5 minutes until warmed through.
- Combine Ingredients: In a large bowl, combine the cooked quinoa, sautéed vegetable mixture, juice of 1 large lime, drained black beans, enchilada sauce, 1.5 cups of shredded Mexican cheese, cumin, cayenne, chili powder, and smoked paprika. Mix thoroughly and adjust salt and pepper to taste if needed.
- Prepare for Baking: Transfer the combined mixture evenly into a 9 x 13 inch baking dish, spreading it out smoothly.
- Bake First Phase: Preheat the oven to 375°F (190°C) and bake the casserole for 20 minutes to heat through and allow flavors to meld.
- Add Cheese Topping: Remove the casserole from the oven and sprinkle the remaining 1.5 cups of shredded Mexican cheese evenly on top.
- Bake Second Phase: Return the casserole to the oven and bake for an additional 10 minutes or until the cheese is melted and bubbly.
- Garnish and Serve: Remove from oven and top with diced roma tomatoes and diced avocado. Serve with optional fresh lime wedges, tortilla chips, and a dollop of sour cream for extra flavor and texture.
Notes
- For extra protein boost, add cooked chicken or ground turkey if not vegetarian.
- Adjust the spice level by adding more or less jalapeno and cayenne pepper according to your heat preference.
- Leftovers can be stored in an airtight container in the refrigerator for up to 3 days and reheated.
- Use homemade enchilada sauce for fresher flavor or check labels for gluten-free options if needed.
- Quinoa should be rinsed before cooking to remove the natural coating called saponin, which can taste bitter.
Nutrition
- Serving Size: 1 cup
- Calories: 360 kcal
- Sugar: 5 g
- Sodium: 570 mg
- Fat: 14 g
- Saturated Fat: 6 g
- Unsaturated Fat: 7 g
- Trans Fat: 0 g
- Carbohydrates: 44 g
- Fiber: 9 g
- Protein: 15 g
- Cholesterol: 30 mg
Keywords: Mexican quinoa casserole, vegetarian casserole, quinoa recipe, Mexican casserole, healthy casserole, vegetarian dinner, quinoa black beans, enchilada casserole